ATP binding domain 4 Structures: Difference between revisions

From MDWiki
Jump to navigationJump to search
No edit summary
No edit summary
Line 48: Line 48:




== Ligand Binding Sites and Surface Clefts ==
== Surface Clefts ==
 
[[Image:PDBsum11.PNG]]


[[Image:PDBsum cleft.PNG]]
[[Image:PDBsum cleft.PNG]]

Revision as of 00:41, 29 May 2009

Daniel's page in progress


Useful info

Here is some useful paper. check it out Link to Paper: http://pfam.sanger.ac.uk/family?acc=PF00764 Dali: http://ekhidna.biocenter.helsinki.fi/dali_server/results/20090512-0051-3897fbdf5431ad2e808e66dde1070610/index.html#alignment-7 Interpro: http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002761

SCOP Work

http://scop.mrc-lmb.cam.ac.uk/scop/data/scop.b.d.cj.c.b.bb.html


Pymol Work

Surface Structure

1st.gif

1ru8.png


Secondary Structure and Location of P-loop (ATP binding site)

PDBsum chain.JPG


1RU8 has 2 domain

1RU8 as 2 domain.png


Electrostatic Surface Potential

1ru8 electro surface.png


Alignment of 1RU8 and 2NZ2 (align 1RU8 & i. 11-16, 2NZ2 & i. 11-15)

Dalii.PNG


1RU8 and 2NZ2

1ru8 n 2nz2.png


Surface Clefts

PDBsum cleft.PNG


Surface Topography

Topo.PNG

Retrieved from "http://compbio.biosci.uq.edu.au/mediawiki/index.php?title=ATP_binding_domain_4_Structures&oldid=12709"