ATP binding domain 4 Structures

Daniel's page in progress

Useful info

Here is some useful paper. check it out Link to Paper: http://pfam.sanger.ac.uk/family?acc=PF00764 Dali: http://ekhidna.biocenter.helsinki.fi/dali_server/results/20090512-0051-3897fbdf5431ad2e808e66dde1070610/index.html#alignment-7 Interpro: http://www.ebi.ac.uk/interpro/DisplayIproEntry?ac=IPR002761 (align 1RU8 & i. 11-16, 2NZ2 & i. 11-15)

SCOP Work

http://scop.mrc-lmb.cam.ac.uk/scop/data/scop.b.d.cj.c.b.bb.html

Surface Structure

The three-dimensional structure of secondary structure 1RU8, as generated by PyMOL

Purple- Helix
Yellow - Sheet
Green- Loop

The three-dimensional surface structure of 1RU8, as generated by PyMOL

Note that there is a artificial ligand (purple) bound to the protein

Secondary Structure and Location of P-loop (ATP binding site)

1RU8 has 2 domain

Electrostatic Surface Potential

Alignment of 1RU8 and 2NZ2

1RU8 and 2NZ2

Surface Clefts

Surface Topography

Topology Diagram of 1RU8