Arylformamidase Function Slide 4: Difference between revisions

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== Thermostable? ==
== Evidence from Similar Structures ==


'''Structural similarity'''
- Screening of DALI result (see Basma) for functional information.


  No:  Chain  Z    rmsd lali nres  %id  Description
- Most similar structure well-characterised:
  1:  2pbl-A 52.4  0.0  262  262  100  MOLECULE: PUTATIVE ESTERASE/LIPASE/THIOESTERASE;                   
  5:  2c7b-A 23.4  3.0  231  294  16  MOLECULE: CARBOXYLESTERASE;                                         
  9:  1jji-A 23.0  3.1  233  311  15  MOLECULE: CARBOXYLESTERASE;                                         
  14:  1evq-A 21.4  2.9  225  308  18  MOLECULE: SERINE HYDROLASE;                                         


'''Sequence similarity'''
''Byun JS, Rhee JK, Kim ND, Yoon J, Kim DU, Koh E, Oh JW, Cho HS.''
'''[http://www.ncbi.nlm.nih.gov/pubmed/17625021?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum Crystal structure of hyperthermophilic esterase EstE1 and the relationship between its dimerization and thermostability properties.]'''
BMC Struct Biol. 2007 Jul 12;7:47.


[[Image:HSL_alignment.png|centre|framed|'''Alignment with thermophillic HSL family members identified by Byun 2007.''']]
- A thermostable carboxylesterase from an uncultured archaeon - isolated in an environmental sample.
 
'''Ecology''' - an aquatic organism widely present throughout world's oceans.


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Latest revision as of 12:29, 8 June 2008

Evidence from Similar Structures

- Screening of DALI result (see Basma) for functional information.

- Most similar structure well-characterised:

Byun JS, Rhee JK, Kim ND, Yoon J, Kim DU, Koh E, Oh JW, Cho HS.
Crystal structure of hyperthermophilic esterase EstE1 and the relationship between its dimerization and thermostability properties.
BMC Struct Biol. 2007 Jul 12;7:47.

- A thermostable carboxylesterase from an uncultured archaeon - isolated in an environmental sample.

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